Harvest for Yamano et al 2000 Created 16 Jun 13:41

Stage: completed
Fetched: 16 Jun 13:41
Validated: 16 Jun 13:41
Deltas Created 16 Jun 13:41
Units Normalized: 16 Jun 13:41
Ancestry Built: 16 Jun 13:41
Nodes Matched: 16 Jun 13:41
Names Parsed: 16 Jun 13:41
New Models Stored: 16 Jun 13:41
Indexed: 16 Jun 13:41
Completed: 16 Jun 13:43
Time to Harvest: less than a minute

Expected File Format Definitions

Harvesting Log (most recent first)

# Logfile created on 2020-04-03 15:00:30 -0400 by logger.rb/56815
[START] [2020-04-03 15:00:30] logged process
[START] [2020-04-03 15:00:30] create_harvest_instance
[STOP] [2020-04-03 15:00:31] create_harvest_instance
[START] [2020-04-03 15:00:31] fetch_files
[STOP] [2020-04-03 15:00:31] fetch_files
[START] [2020-04-03 15:00:31] validate_each_file
[STOP] [2020-04-03 15:00:31] validate_each_file
[START] [2020-04-03 15:00:31] convert_to_csv
[CMD] [2020-04-03 15:00:31] /usr/bin/sort /app/public/converted_csv/yamano_et_al_yam_nodes_20568.csv > /app/public/converted_csv/yamano_et_al_yam_nodes_20568.csv_sorted
[CMD] [2020-04-03 15:00:31] /usr/bin/sort /app/public/converted_csv/yamano_et_al_yam_occurrences_20569.csv > /app/public/converted_csv/yamano_et_al_yam_occurrences_20569.csv_sorted
[CMD] [2020-04-03 15:00:31] /usr/bin/sort /app/public/converted_csv/yamano_et_al_yam_measurements_20570.csv > /app/public/converted_csv/yamano_et_al_yam_measurements_20570.csv_sorted
[STOP] [2020-04-03 15:00:31] convert_to_csv
[START] [2020-04-03 15:00:31] calculate_delta
[CMD] [2020-04-03 15:00:31] echo "0a" > /app/public/diff/yamano_et_al_yam_nodes_20568.diff
[CMD] [2020-04-03 15:00:31] tail -n +1 /app/public/converted_csv/yamano_et_al_yam_nodes_20568.csv >> /app/public/diff/yamano_et_al_yam_nodes_20568.diff
[CMD] [2020-04-03 15:00:31] echo "." >> /app/public/diff/yamano_et_al_yam_nodes_20568.diff
[CMD] [2020-04-03 15:00:31] echo "0a" > /app/public/diff/yamano_et_al_yam_occurrences_20569.diff
[CMD] [2020-04-03 15:00:31] tail -n +1 /app/public/converted_csv/yamano_et_al_yam_occurrences_20569.csv >> /app/public/diff/yamano_et_al_yam_occurrences_20569.diff
[CMD] [2020-04-03 15:00:31] echo "." >> /app/public/diff/yamano_et_al_yam_occurrences_20569.diff
[CMD] [2020-04-03 15:00:31] echo "0a" > /app/public/diff/yamano_et_al_yam_measurements_20570.diff
[CMD] [2020-04-03 15:00:31] tail -n +1 /app/public/converted_csv/yamano_et_al_yam_measurements_20570.csv >> /app/public/diff/yamano_et_al_yam_measurements_20570.diff
[CMD] [2020-04-03 15:00:31] echo "." >> /app/public/diff/yamano_et_al_yam_measurements_20570.diff
[STOP] [2020-04-03 15:00:31] calculate_delta
[START] [2020-04-03 15:00:31] parse_diff_and_store
[INFO] [2020-04-03 15:00:31] Loading nodes diff file into memory (true lines)...
[INFO] [2020-04-03 15:00:31] Loading occurrences diff file into memory (true lines)...
[INFO] [2020-04-03 15:00:31] Loading measurements diff file into memory (true lines)...
[INFO] [2020-04-03 15:00:31] Storing 7 ScientificNames
[INFO] [2020-04-03 15:00:31] Processing group of 7 in 1 groups of 1000
[INFO] [2020-04-03 15:00:31] Average Time: 0.0
[INFO] [2020-04-03 15:00:31] Total Time: 1s
[INFO] [2020-04-03 15:00:31] Storing 7 Nodes
[INFO] [2020-04-03 15:00:31] Processing group of 7 in 1 groups of 1000
[INFO] [2020-04-03 15:00:31] Average Time: 0.0
[INFO] [2020-04-03 15:00:31] Total Time: 1s
[INFO] [2020-04-03 15:00:31] Storing 7 Occurrences
[INFO] [2020-04-03 15:00:31] Processing group of 7 in 1 groups of 1000
[INFO] [2020-04-03 15:00:31] Average Time: 0.0
[INFO] [2020-04-03 15:00:31] Total Time: 1s
[INFO] [2020-04-03 15:00:31] Storing 25 Traits
[INFO] [2020-04-03 15:00:31] Processing group of 25 in 1 groups of 1000
[INFO] [2020-04-03 15:00:31] Average Time: 0.01
[INFO] [2020-04-03 15:00:31] Total Time: 1s
[INFO] [2020-04-03 15:00:31] Storing 21 MetaTraits
[INFO] [2020-04-03 15:00:31] Processing group of 21 in 1 groups of 1000
[INFO] [2020-04-03 15:00:31] Average Time: 0.0
[INFO] [2020-04-03 15:00:31] Total Time: 1s
[STOP] [2020-04-03 15:00:31] parse_diff_and_store
[START] [2020-04-03 15:00:31] resolve_keys
[INFO] [2020-04-03 15:00:36] Occurrences to nodes (through scientific_names)...
[INFO] [2020-04-03 15:00:36] traits to occurrences...
[INFO] [2020-04-03 15:00:36] traits to nodes (through occurrences)...
[INFO] [2020-04-03 15:00:36] Traits to sex term...
[INFO] [2020-04-03 15:00:36] Traits to lifestage term...
[INFO] [2020-04-03 15:00:36] MetaTraits to traits...
[INFO] [2020-04-03 15:00:36] MetaTraits (simple, measurement row refers to parent) to traits...
[INFO] [2020-04-03 15:00:36] Assocs to occurrences...
[INFO] [2020-04-03 15:00:36] Assocs to nodes...
[INFO] [2020-04-03 15:00:36] Assoc to sex term...
[INFO] [2020-04-03 15:00:36] Assoc to lifestage term...
[STOP] [2020-04-03 15:00:36] resolve_keys
[START] [2020-04-03 15:00:36] hold_for_later_1
[STOP] [2020-04-03 15:00:36] hold_for_later_1
[START] [2020-04-03 15:00:36] hold_for_later_2
[STOP] [2020-04-03 15:00:36] hold_for_later_2
[START] [2020-04-03 15:00:36] resolve_missing_parents
[STOP] [2020-04-03 15:00:36] resolve_missing_parents
[START] [2020-04-03 15:00:36] rebuild_nodes
[START] [2020-04-03 15:00:36] Flattener#flatten
[START] [2020-04-03 15:00:36] Flattener#study_resource
[START] [2020-04-03 15:00:36] Flattener#build_ancestry
[STOP] [2020-04-03 15:00:36] Flattener#build_ancestry
[INFO] [2020-04-03 15:00:36] 7 ancestry keys
[START] [2020-04-03 15:00:36] build_node_ancestors
[INFO] [2020-04-03 15:00:36] old ancestors deleted.
[STOP] [2020-04-03 15:00:36] build_node_ancestors
[WARN] [2020-04-03 15:00:36] Flattener: nothing to flatten! (Completely flat resource?)
[STOP] [2020-04-03 15:00:36] Flattener#flatten
[STOP] [2020-04-03 15:00:36] rebuild_nodes
[START] [2020-04-03 15:00:36] resolve_missing_media_owners
[STOP] [2020-04-03 15:00:36] resolve_missing_media_owners
[START] [2020-04-03 15:00:36] sanitize_media_verbatims
[STOP] [2020-04-03 15:00:36] sanitize_media_verbatims
[START] [2020-04-03 15:00:36] queue_downloads
[STOP] [2020-04-03 15:00:36] queue_downloads
[START] [2020-04-03 15:00:36] parse_names
[WARN] [2020-04-03 15:00:36] I see 7 names which still need to be parsed.
[STOP] [2020-04-03 15:00:37] parse_names
[START] [2020-04-03 15:00:37] denormalize_canonical_names_to_nodes
[STOP] [2020-04-03 15:00:37] denormalize_canonical_names_to_nodes
[START] [2020-04-03 15:00:37] match_nodes
[START] [2020-04-03 15:00:37] map_all_nodes_to_pages
[STOP] [2020-04-03 15:00:37] map_all_nodes_to_pages
[INFO] [2020-04-03 15:00:37] ZERO unmatched nodes (of 7)! Nicely done.
[START] [2020-04-03 15:00:37] update_nodes
[STOP] [2020-04-03 15:00:37] update_nodes
[STOP] [2020-04-03 15:00:37] match_nodes
[START] [2020-04-03 15:00:37] reindex_search
[STOP] [2020-04-03 15:00:37] reindex_search
[START] [2020-04-03 15:00:37] normalize_units
[STOP] [2020-04-03 15:00:38] normalize_units
[START] [2020-04-03 15:00:38] calculate_statistics
[2020-04-03 15:00:38] ZERO NODE ANCESTORS. Is this actually a completely flat resource?
[STOP] [2020-04-03 15:00:38] calculate_statistics
[START] [2020-04-03 15:00:38] complete_harvest_instance
[START] [2020-04-03 15:00:38] overall_tsv_creation
[INFO] [2020-04-03 15:00:38] Processing group of 7 in 1 batches of 10000
[INFO] [2020-04-03 15:01:28] 7 Traits (unfiltered)...
[INFO] [2020-04-03 15:01:40] 7 Traits (filtered)...
[INFO] [2020-04-03 15:01:40] 0 Associations (filtered)...
[INFO] [2020-04-03 15:02:16] 39 metadata added.
[INFO] [2020-04-03 15:02:16] 0 metadata added.
[INFO] [2020-04-03 15:02:16] Average Time: 70.33
[INFO] [2020-04-03 15:02:16] Total Time: 1m39s
[STOP] [2020-04-03 15:02:16] overall_tsv_creation
[INFO] [2020-04-03 15:02:16] Done. Check your files:
[INFO] [2020-04-03 15:02:16] (7 lines) /app/public/data/yamano_et_al_yam/publish_nodes.tsv
[INFO] [2020-04-03 15:02:16] (7 lines) /app/public/data/yamano_et_al_yam/publish_scientific_names.tsv
[INFO] [2020-04-03 15:02:16] (8 lines) /app/public/data/yamano_et_al_yam/publish_traits.tsv
[INFO] [2020-04-03 15:02:17] (40 lines) /app/public/data/yamano_et_al_yam/publish_metadata.tsv
[STOP] [2020-04-03 15:02:17] complete_harvest_instance
[START] [2020-04-03 15:02:17] completed
[STOP] [2020-04-03 15:02:17] completed
[STOP] [2020-04-03 15:02:17] logged process, took 106.4
[INFO] [2020-06-16 13:41:25] ## HARVEST: type = re_download_opendata_-harvest
[INFO] [2020-06-16 13:41:26] ## remove_type: ScientificName
[INFO] [2020-06-16 13:41:26] ++ Calling delete_all on 7 instances...
[INFO] [2020-06-16 13:41:26] [13:41:26.948] Removed 7 Scientificnames
[INFO] [2020-06-16 13:41:26] ## remove_type: Vernacular
[INFO] [2020-06-16 13:41:26] ++ Calling delete_all on 0 instances...
[INFO] [2020-06-16 13:41:26] [13:41:26.951] Removed 0 Vernaculars
[INFO] [2020-06-16 13:41:26] ## remove_type: Article
[INFO] [2020-06-16 13:41:26] ++ Calling delete_all on 0 instances...
[INFO] [2020-06-16 13:41:26] [13:41:26.953] Removed 0 Articles
[INFO] [2020-06-16 13:41:26] ## remove_type: Medium
[INFO] [2020-06-16 13:41:26] ++ Calling delete_all on 0 instances...
[INFO] [2020-06-16 13:41:26] [13:41:26.957] Removed 0 Media
[INFO] [2020-06-16 13:41:26] ## remove_type: Trait
[INFO] [2020-06-16 13:41:26] ++ Calling delete_all on 25 instances...
[INFO] [2020-06-16 13:41:26] [13:41:26.961] Removed 25 Traits
[INFO] [2020-06-16 13:41:26] ## remove_type: MetaTrait
[INFO] [2020-06-16 13:41:26] ++ Calling delete_all on 21 instances...
[INFO] [2020-06-16 13:41:26] [13:41:26.964] Removed 21 Metatraits
[INFO] [2020-06-16 13:41:26] ## remove_type: OccurrenceMetadatum
[INFO] [2020-06-16 13:41:26] ++ Calling delete_all on 0 instances...
[INFO] [2020-06-16 13:41:26] [13:41:26.971] Removed 0 Occurrencemetadata
[INFO] [2020-06-16 13:41:26] ## remove_type: Assoc
[INFO] [2020-06-16 13:41:26] ++ Calling delete_all on 0 instances...
[INFO] [2020-06-16 13:41:26] [13:41:26.973] Removed 0 Assocs
[INFO] [2020-06-16 13:41:26] ## remove_type: MetaAssoc
[INFO] [2020-06-16 13:41:26] ++ Calling delete_all on 0 instances...
[INFO] [2020-06-16 13:41:26] [13:41:26.976] Removed 0 Metaassocs
[INFO] [2020-06-16 13:41:26] ## remove_type: Identifier
[INFO] [2020-06-16 13:41:26] ++ Calling delete_all on 0 instances...
[INFO] [2020-06-16 13:41:26] [13:41:26.992] Removed 0 Identifiers
[INFO] [2020-06-16 13:41:26] ## remove_type: Reference
[INFO] [2020-06-16 13:41:26] ++ Calling delete_all on 0 instances...
[INFO] [2020-06-16 13:41:26] [13:41:26.995] Removed 0 References
[INFO] [2020-06-16 13:41:28] Starting batch with ID 68185321...
[INFO] [2020-06-16 13:41:28] ## remove_type: Node
[INFO] [2020-06-16 13:41:28] ++ Calling delete_all on 7 instances...
[INFO] [2020-06-16 13:41:28] [13:41:28.822] Removed 7 Nodes
[START] [2020-06-16 13:41:29] logged process
[START] [2020-06-16 13:41:29] Creating resource from OpenData
[START] [2020-06-16 13:41:29] logged process
[START] [2020-06-16 13:41:29] Parse meta.xml file and create formats with fields
[STOP] [2020-06-16 13:41:29] Parse meta.xml file and create formats with fields
[STOP] [2020-06-16 13:41:29] Creating resource from OpenData
[START] [2020-06-16 13:41:29] logged process
[START] [2020-06-16 13:41:29] create_harvest_instance
[STOP] [2020-06-16 13:41:30] create_harvest_instance
[START] [2020-06-16 13:41:30] fetch_files
[STOP] [2020-06-16 13:41:30] fetch_files
[START] [2020-06-16 13:41:30] validate_each_file
[STOP] [2020-06-16 13:41:30] validate_each_file
[START] [2020-06-16 13:41:30] convert_to_csv
[CMD] [2020-06-16 13:41:30] /usr/bin/sort /app/public/converted_csv/yamano_et_al_yam_nodes_21356.csv > /app/public/converted_csv/yamano_et_al_yam_nodes_21356.csv_sorted
[CMD] [2020-06-16 13:41:30] /usr/bin/sort /app/public/converted_csv/yamano_et_al_yam_occurrences_21357.csv > /app/public/converted_csv/yamano_et_al_yam_occurrences_21357.csv_sorted
[CMD] [2020-06-16 13:41:30] /usr/bin/sort /app/public/converted_csv/yamano_et_al_yam_measurements_21358.csv > /app/public/converted_csv/yamano_et_al_yam_measurements_21358.csv_sorted
[STOP] [2020-06-16 13:41:30] convert_to_csv
[START] [2020-06-16 13:41:30] calculate_delta
[CMD] [2020-06-16 13:41:30] echo "0a" > /app/public/diff/yamano_et_al_yam_nodes_21356.diff
[CMD] [2020-06-16 13:41:30] tail -n +1 /app/public/converted_csv/yamano_et_al_yam_nodes_21356.csv >> /app/public/diff/yamano_et_al_yam_nodes_21356.diff
[CMD] [2020-06-16 13:41:30] echo "." >> /app/public/diff/yamano_et_al_yam_nodes_21356.diff
[CMD] [2020-06-16 13:41:30] echo "0a" > /app/public/diff/yamano_et_al_yam_occurrences_21357.diff
[CMD] [2020-06-16 13:41:30] tail -n +1 /app/public/converted_csv/yamano_et_al_yam_occurrences_21357.csv >> /app/public/diff/yamano_et_al_yam_occurrences_21357.diff
[CMD] [2020-06-16 13:41:30] echo "." >> /app/public/diff/yamano_et_al_yam_occurrences_21357.diff
[CMD] [2020-06-16 13:41:30] echo "0a" > /app/public/diff/yamano_et_al_yam_measurements_21358.diff
[CMD] [2020-06-16 13:41:30] tail -n +1 /app/public/converted_csv/yamano_et_al_yam_measurements_21358.csv >> /app/public/diff/yamano_et_al_yam_measurements_21358.diff
[CMD] [2020-06-16 13:41:30] echo "." >> /app/public/diff/yamano_et_al_yam_measurements_21358.diff
[STOP] [2020-06-16 13:41:30] calculate_delta
[START] [2020-06-16 13:41:30] parse_diff_and_store
[INFO] [2020-06-16 13:41:30] Loading nodes diff file into memory (true lines)...
[INFO] [2020-06-16 13:41:30] Loading occurrences diff file into memory (true lines)...
[INFO] [2020-06-16 13:41:30] Loading measurements diff file into memory (true lines)...
[INFO] [2020-06-16 13:41:30] Storing 7 ScientificNames
[INFO] [2020-06-16 13:41:30] Processing group of 7 in 1 groups of 1000
[INFO] [2020-06-16 13:41:30] Average Time: 0.0
[INFO] [2020-06-16 13:41:30] Total Time: 1s
[INFO] [2020-06-16 13:41:30] Storing 7 Nodes
[INFO] [2020-06-16 13:41:30] Processing group of 7 in 1 groups of 1000
[INFO] [2020-06-16 13:41:31] Average Time: 0.0
[INFO] [2020-06-16 13:41:31] Total Time: 1s
[INFO] [2020-06-16 13:41:31] Storing 7 Occurrences
[INFO] [2020-06-16 13:41:31] Processing group of 7 in 1 groups of 1000
[INFO] [2020-06-16 13:41:31] Average Time: 0.0
[INFO] [2020-06-16 13:41:31] Total Time: 1s
[INFO] [2020-06-16 13:41:31] Storing 25 Traits
[INFO] [2020-06-16 13:41:31] Processing group of 25 in 1 groups of 1000
[INFO] [2020-06-16 13:41:31] Average Time: 0.01
[INFO] [2020-06-16 13:41:31] Total Time: 1s
[INFO] [2020-06-16 13:41:31] Storing 21 MetaTraits
[INFO] [2020-06-16 13:41:31] Processing group of 21 in 1 groups of 1000
[INFO] [2020-06-16 13:41:31] Average Time: 0.0
[INFO] [2020-06-16 13:41:31] Total Time: 1s
[STOP] [2020-06-16 13:41:31] parse_diff_and_store
[START] [2020-06-16 13:41:31] resolve_keys
[INFO] [2020-06-16 13:41:37] Occurrences to nodes (through scientific_names)...
[INFO] [2020-06-16 13:41:37] traits to occurrences...
[INFO] [2020-06-16 13:41:37] traits to nodes (through occurrences)...
[INFO] [2020-06-16 13:41:37] Traits to sex term...
[INFO] [2020-06-16 13:41:37] Traits to lifestage term...
[INFO] [2020-06-16 13:41:37] MetaTraits to traits...
[INFO] [2020-06-16 13:41:37] MetaTraits (simple, measurement row refers to parent) to traits...
[INFO] [2020-06-16 13:41:37] Assocs to occurrences...
[INFO] [2020-06-16 13:41:37] Assocs to nodes...
[INFO] [2020-06-16 13:41:37] Assoc to sex term...
[INFO] [2020-06-16 13:41:37] Assoc to lifestage term...
[STOP] [2020-06-16 13:41:37] resolve_keys
[START] [2020-06-16 13:41:37] hold_for_later_1
[STOP] [2020-06-16 13:41:37] hold_for_later_1
[START] [2020-06-16 13:41:37] hold_for_later_2
[STOP] [2020-06-16 13:41:37] hold_for_later_2
[START] [2020-06-16 13:41:37] resolve_missing_parents
[STOP] [2020-06-16 13:41:37] resolve_missing_parents
[START] [2020-06-16 13:41:37] rebuild_nodes
[START] [2020-06-16 13:41:37] Flattener#flatten
[START] [2020-06-16 13:41:37] Flattener#study_resource
[START] [2020-06-16 13:41:38] Flattener#build_ancestry
[STOP] [2020-06-16 13:41:38] Flattener#build_ancestry
[INFO] [2020-06-16 13:41:38] 7 ancestry keys
[START] [2020-06-16 13:41:38] build_node_ancestors
[INFO] [2020-06-16 13:41:38] old ancestors deleted.
[STOP] [2020-06-16 13:41:38] build_node_ancestors
[WARN] [2020-06-16 13:41:38] Flattener: nothing to flatten! (Completely flat resource?)
[STOP] [2020-06-16 13:41:38] Flattener#flatten
[STOP] [2020-06-16 13:41:38] rebuild_nodes
[START] [2020-06-16 13:41:38] resolve_missing_media_owners
[STOP] [2020-06-16 13:41:38] resolve_missing_media_owners
[START] [2020-06-16 13:41:38] sanitize_media_verbatims
[STOP] [2020-06-16 13:41:38] sanitize_media_verbatims
[START] [2020-06-16 13:41:38] queue_downloads
[STOP] [2020-06-16 13:41:38] queue_downloads
[START] [2020-06-16 13:41:38] parse_names
[WARN] [2020-06-16 13:41:38] I see 7 names which still need to be parsed.
[STOP] [2020-06-16 13:41:39] parse_names
[START] [2020-06-16 13:41:39] denormalize_canonical_names_to_nodes
[STOP] [2020-06-16 13:41:39] denormalize_canonical_names_to_nodes
[START] [2020-06-16 13:41:39] match_nodes
[START] [2020-06-16 13:41:39] map_all_nodes_to_pages
[STOP] [2020-06-16 13:41:39] map_all_nodes_to_pages
[INFO] [2020-06-16 13:41:39] ZERO unmatched nodes (of 7)! Nicely done.
[START] [2020-06-16 13:41:39] update_nodes
[STOP] [2020-06-16 13:41:39] update_nodes
[STOP] [2020-06-16 13:41:39] match_nodes
[START] [2020-06-16 13:41:39] reindex_search
[STOP] [2020-06-16 13:41:39] reindex_search
[START] [2020-06-16 13:41:39] normalize_units
[STOP] [2020-06-16 13:41:39] normalize_units
[START] [2020-06-16 13:41:39] calculate_statistics
[2020-06-16 13:41:39] ZERO NODE ANCESTORS. Is this actually a completely flat resource?
[STOP] [2020-06-16 13:41:39] calculate_statistics
[START] [2020-06-16 13:41:39] complete_harvest_instance
[START] [2020-06-16 13:41:39] overall_tsv_creation
[INFO] [2020-06-16 13:41:39] Processing group of 7 in 1 batches of 10000
[INFO] [2020-06-16 13:42:29] 7 Traits (unfiltered)...
[INFO] [2020-06-16 13:42:42] 7 Traits (filtered)...
[INFO] [2020-06-16 13:42:42] 0 Associations (filtered)...
[INFO] [2020-06-16 13:43:19] 39 metadata added.
[INFO] [2020-06-16 13:43:19] 0 metadata added.
[INFO] [2020-06-16 13:43:19] Average Time: 72.42
[INFO] [2020-06-16 13:43:19] Total Time: 1m41s
[STOP] [2020-06-16 13:43:19] overall_tsv_creation
[INFO] [2020-06-16 13:43:19] Done. Check your files:
[INFO] [2020-06-16 13:43:19] (7 lines) /app/public/data/yamano_et_al_yam/publish_nodes.tsv
[INFO] [2020-06-16 13:43:19] (7 lines) /app/public/data/yamano_et_al_yam/publish_scientific_names.tsv
[INFO] [2020-06-16 13:43:19] (8 lines) /app/public/data/yamano_et_al_yam/publish_traits.tsv
[INFO] [2020-06-16 13:43:19] (40 lines) /app/public/data/yamano_et_al_yam/publish_metadata.tsv
[STOP] [2020-06-16 13:43:19] complete_harvest_instance
[START] [2020-06-16 13:43:19] completed
[STOP] [2020-06-16 13:43:19] completed
[STOP] [2020-06-16 13:43:19] logged process, took 110.57

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